Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015836918.1_cds_XP_016506474.1_19695
CDS Infomation

[gene=LOC107824241] [db_xref=GeneID:107824241] [protein=protein HGV2-like] [protein_id=XP_016506474.1] [location=join(52692..52963,53955..54211,55554..55760,56890..56980,57132..57399,57478..57810)] [gbkey=CDS]
Sequence

ATGGCTGAGGAAGTAGCAAATTCAGAAACAGCAAGCCCTACGCCGGAGCAGAACCAGAAT
TCGGTGAATGCCACCATCGAATCAGGGTTTCAGGGAGGTACAGAATCGACTTGCAACAAT
AATAATGCTGAGAGTTCTGCGGTTACTTCTGATGGTGACCGCGAAAAATCGCTGGAGTAC
GCCGATGAGCTAATGGAGAAAGGTGCTAAGGCCGATAAAGATGGAGATTATGGAGAGGCC
GTTGAATGCTATAGTCGTGCCCTAGAAATCCGGGTTGCACATTTTGGTGAACTTGCTCCT
GAATGTATCAATGCATACTATAGATATGGGTGTGCTTTGCTGTGCAAAGCTCAGGATGAG
GCTGATCCTTTGGTTTCTATACCTAAAAAGGACAGCGAGTCTCAACAAGATTCTAATAGA
GATGGTTCTGTTAAGAGTGCTGTTAGTTGTGAATCTTCTGTTGCTTCTATCTCAAGTACT
GGTGAACCAGGTGGAAGCTCAAATGGAAAGGAGAAAGAGGAAGATGATGCTGCAGAGGAA
AAAGACAATGAAGGAGATGAAGATGAAGAAGAAAGTGATGCTGAGGATGTGGCTGAAGGT
GATGAGGATGAAACTGACCTGGATTTAGCCTGGAAACTGTTAGATGTTGCAAGGGCAATT
GCTGAAAAGCACTCTGGTGACACAATGGAAAAAGTGGATGTATTATCAGCTTTGGCTGAG
GTAGCCTTGGAAAGAGAGGATCTTGAAACTTCCCTTAGTGATTACCTGAAGGCATTATCC
ATTTTGGAACGCTTGGTTGAACCTGACAGTCGCCATATTGCTGAGCTCAACTTTAGGATA
TGTTTATGTCTGGAAATTGCTTCTAAGCCTCAGGAAGCCATACCATACTGCCAAAAAGCT
GTTTCGACTTGCAAGTCGCGGCTACAGAGGCTCACCGATGAAATAAAGCTTTTGTCAGAA
TCAACAGAAAGATCAGCTACTAATGTAGATCAGATTGCGAGACAATCGTCCAGTGCATCA
CAGTCCGACTCTGTATCTGCTAAAGAAGCAGAGATTGAAACGCTCACAGGTCTATCTGCA
GAATTGGAGAAAAAGCTTGAAGATTTGCAGCAGTGCATGTCAAATCCATCATCTATCCTC
TCAGATATTCTGGGATTGGTTTCTGCGAAAGCAAGAAGTACGGAAAAAGCTTCTTCTTCT
ATGGCTGTGAGCTCTTCACAGATGGGTGCTGCTGCCAGTGGTAGTGGAGGTTTTGACTCT
CCAACCGTTTCCACTGCTCACACAAATGAGGCAGCTGGAGTGACTCATCTAGGTGTAGTG
GGAAGAGGAGTCAAGAGGGTGCTGCTAAACACAACTACAGAGTCTAGTCCAATGAAAAAG
CCTGCATCTGAGCCGCCATCAAATAATGGAGATGGCAGTGCCTCGTAA

Peptide Sequence

PEP ID

XP_016506474.1
PEP Infomation

PREDICTED: protein HGV2-like [Nicotiana tabacum]
Sequence

MAEEVANSETASPTPEQNQNSVNATIESGFQGGTESTCNNNNAESSAVTSDGDREKSLEY
ADELMEKGAKADKDGDYGEAVECYSRALEIRVAHFGELAPECINAYYRYGCALLCKAQDE
ADPLVSIPKKDSESQQDSNRDGSVKSAVSCESSVASISSTGEPGGSSNGKEKEEDDAAEE
KDNEGDEDEEESDAEDVAEGDEDETDLDLAWKLLDVARAIAEKHSGDTMEKVDVLSALAE
VALEREDLETSLSDYLKALSILERLVEPDSRHIAELNFRICLCLEIASKPQEAIPYCQKA
VSTCKSRLQRLTDEIKLLSESTERSATNVDQIARQSSSASQSDSVSAKEAEIETLTGLSA
ELEKKLEDLQQCMSNPSSILSDILGLVSAKARSTEKASSSMAVSSSQMGAAASGSGGFDS
PTVSTAHTNEAAGVTHLGVVGRGVKRVLLNTTTESSPMKKPASEPPSNNGDGSAS

Transcript Sequence

Gene sequence data has not been registered.